Blar i NTNU Open på forfatter "Stovner, Endre Bakken"

Viser treff 1-4 av 4

    • Joint changes in RNA, RNA polymerase II, and promoter activity through the cell cycle identify non-coding RNAs involved in proliferation 

      Hegre, Siv Anita; Samdal, Helle; Klima, Antonin; Stovner, Endre Bakken; Nørsett, Kristin Gabestad; Liabakk, Nina-Beate; Olsen, Lene Christin; Chawla, Konika; Aas, Per Arne; Sætrom, Pål (Peer reviewed; Journal article, 2021)
      Proper regulation of the cell cycle is necessary for normal growth and development of all organisms. Conversely, altered cell cycle regulation often underlies proliferative diseases such as cancer. Long non-coding RNAs ...

    • Methplotlib: Analysis of modified nucleotides from nanopore sequencing 

      De Coster, Wouter; Stovner, Endre Bakken; Strazisar, Mojca (Journal article; Peer reviewed, 2020)
      Summary Modified nucleotides play a crucial role in gene expression regulation. Here, we describe methplotlib, a tool developed for the visualization of modified nucleotides detected from Oxford Nanopore Technologies ...

    • PyRanges: efficient comparison of genomic intervals in Python 

      Stovner, Endre Bakken; Sætrom, Pål (Journal article; Peer reviewed, 2019)
      Complex genomic analyses often use sequences of simple set operations like intersection, overlap and nearest on genomic intervals. These operations, coupled with some custom programming, allow a wide range of analyses to ...

    • Three investigations of piRNA: Making sense of a new class of molecules 

      Stovner, Endre Bakken (Master thesis, 2013)
      This master s thesis is about Piwi-interacting RNA (piRNA) and its object is threefold. We will investigate i) how well a Support Vector Machine (SVM)-based method compares to the currently used software for piRNA cluster ...